checkpoint: matrix-agent-validated (2026-04-25)

Architectural snapshot of the lakehouse codebase at the point where the
full matrix-driven agent loop with Mem0 versioning + deletion was
validated end-to-end.

WHAT THIS REPO IS
A clean single-commit snapshot of the lakehouse code. Heavy test data
(.parquet datasets, vector indexes) excluded — see REPLICATION.md for
regen path. Full lakehouse history at git.agentview.dev/profit/lakehouse.

WHAT WAS PROVEN
- Vector retrieval across multi-corpora matrix (chicago_permits + entity
  briefs + sec_tickers + distilled procedural + llm_team runs)
- Observer hand-review (cloud + heuristic fallback) gating each candidate
- Local-model agent loop (qwen3.5:latest) with tool use + scratchpad
- Playbook seal on success → next-iter retrieval surfaces it as preamble
- Mem0 versioning + deletion in pathway_memory:
    * UPSERT: ADD on new workflow, UPDATE bumps replay_count on identical
    * REVISE: chains versions, parent.superseded_at + superseded_by stamped
    * RETIRE: marks specific trace retired with reason, excluded from retrieval
    * HISTORY: walks chain root→tip, cycle-safe

KEY DIRECTORIES
- crates/vectord/src/pathway_memory.rs — Mem0 ops live here
- crates/vectord/src/playbook_memory.rs — original Mem0 reference
- tests/agent_test/ — local-model agent harness + PRD + session archives
- scripts/dump_raw_corpus.sh — MinIO bucket dump (raw test corpus)
- scripts/vectorize_raw_corpus.ts — corpus → vector indexes
- scripts/analyze_chicago_contracts.ts — real inference pipeline
- scripts/seal_agent_playbook.ts — Mem0 upsert from agent traces

Replication: see REPLICATION.md for Debian 13 clean install + cloud-only
adaptation (no local Ollama).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
This commit is contained in:
profit
2026-04-25 19:43:27 -05:00
co-authored by Claude Opus 4.7
commit ac01fffd9a
325 changed files with 82720 additions and 0 deletions
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// Local-KB check — reads data/_kb/ + data/_observer/ + data/_bot/
// for prior evidence bearing on this PR's claims. Cheap, offline,
// no model calls. The point: if a claim like "Phase X shipped" has
// a historical record of failing on the same signature before, the
// auditor surfaces that pattern before the cloud check has to
// infer it.
//
// What this check reads (all file-backed, append-only or periodic):
// data/_kb/outcomes.jsonl — per-scenario outcomes (kb.ts)
// data/_kb/error_corrections.jsonl — fail→succeed deltas on same sig
// data/_kb/scrum_reviews.jsonl — scrum-master accepted reviews
// data/_observer/ops.jsonl — observer ring → disk stream
// data/_bot/cycles/*.json — bot cycle results
//
// Each JSONL line / per-cycle file is small; this check reads tails
// only (last N lines or last M files) to stay cheap on large corpora.
import { readFile, readdir, stat } from "node:fs/promises";
import { join } from "node:path";
import type { Claim, Finding } from "../types.ts";
import { aggregate, ratingSeverity, formatAgg } from "../kb_index.ts";
const KB_DIR = "/home/profit/lakehouse/data/_kb";
const OBSERVER_OPS = "/home/profit/lakehouse/data/_observer/ops.jsonl";
const BOT_CYCLES_DIR = "/home/profit/lakehouse/data/_bot/cycles";
const SCRUM_REVIEWS_JSONL = "/home/profit/lakehouse/data/_kb/scrum_reviews.jsonl";
const AUDIT_LESSONS_JSONL = "/home/profit/lakehouse/data/_kb/audit_lessons.jsonl";
const AUDIT_FACTS_JSONL = "/home/profit/lakehouse/data/_kb/audit_facts.jsonl";
const TAIL_LINES = 500;
const MAX_BOT_CYCLE_FILES = 30;
export async function runKbCheck(claims: Claim[], prFiles: string[] = []): Promise<Finding[]> {
const findings: Finding[] = [];
// 1. Recent scenario outcomes: are strong-claim-style phrases showing
// up alongside failed events? That's "we claimed it worked" +
// "it didn't" in the KB.
const scenarioFindings = await checkScenarioOutcomes(claims);
findings.push(...scenarioFindings);
// 2. Error corrections: any of the claims text overlap a
// recently-observed fail→succeed pair? If yes, add context.
const correctionFindings = await checkErrorCorrections(claims);
findings.push(...correctionFindings);
// 3. Bot cycles: any prior bot cycle ended in tests_failed or
// apply_failed on a file this PR is also touching?
const botFindings = await checkBotCycles();
findings.push(...botFindings);
// 4. Observer: count recent error events. High volume = shared
// infra problem, worth flagging (context for other findings).
const obsFindings = await checkObserverStream();
findings.push(...obsFindings);
// 5. Scrum-master reviews — surface prior accepted reviews for any
// file in this PR's diff. Cohesion plan Phase C wire: the
// auditor gets to "borrow" the scrum-master's deeper per-file
// analysis instead of re-doing that work.
if (prFiles.length > 0) {
const scrumFindings = await checkScrumReviews(prFiles);
findings.push(...scrumFindings);
}
// 6b. Audit-facts (llm_team extract pipeline output) — surface
// entities that recur across multiple PRs. These are the
// "core system entities" accumulating in the knowledge base;
// showing them as info on future audits gives reviewers
// architectural context the raw diff doesn't convey.
const factFindings = await checkAuditFacts();
findings.push(...factFindings);
// 6. Audit-lessons feedback loop — summarize the top recurring
// patterns from prior audits' block/warn findings. If the same
// pattern signature has fired 3+ times across prior audits,
// emit it as a block-severity finding so reviewers know this
// is a known-recurring class, not a one-off. Does NOT couple
// to the current audit's static/inference findings (those run
// in parallel and we can't see them here) — the amplification
// is emergent: if the current audit's finding-summary matches
// a top recurrence, the reviewer sees both.
const auditLessonFindings = await checkAuditLessons();
findings.push(...auditLessonFindings);
return findings;
}
async function tailJsonl<T = any>(path: string, n: number): Promise<T[]> {
try {
const raw = await readFile(path, "utf8");
const lines = raw.split("\n").filter(l => l.length > 0);
const slice = lines.slice(-n);
const out: T[] = [];
for (const line of slice) {
try { out.push(JSON.parse(line)); } catch { /* skip malformed */ }
}
return out;
} catch {
return [];
}
}
async function checkScenarioOutcomes(_claims: Claim[]): Promise<Finding[]> {
const outcomes = await tailJsonl<any>(join(KB_DIR, "outcomes.jsonl"), TAIL_LINES);
if (outcomes.length === 0) return [];
const totalEvents = outcomes.reduce((s, o) => s + (o.total_events ?? 0), 0);
const okEvents = outcomes.reduce((s, o) => s + (o.ok_events ?? 0), 0);
const failRate = totalEvents > 0 ? 1 - okEvents / totalEvents : 0;
if (totalEvents === 0) {
return [{
check: "kb_query",
severity: "info",
summary: `KB: no scenario outcomes on file — learning loop is empty`,
evidence: [`data/_kb/outcomes.jsonl has ${outcomes.length} entries with 0 total events`],
}];
}
const recent = outcomes.slice(-10);
const recentFailSigs: string[] = recent
.filter(o => (o.ok_events ?? 0) < (o.total_events ?? 0))
.map(o => o.sig_hash)
.filter(s => typeof s === "string");
const findings: Finding[] = [{
check: "kb_query",
severity: failRate > 0.3 ? "warn" : "info",
summary: `KB: ${outcomes.length} recent scenario runs, ${okEvents}/${totalEvents} events ok (fail rate ${(failRate * 100).toFixed(1)}%)`,
evidence: [
`most recent: ${recent[recent.length - 1]?.run_id ?? "?"}`,
`recent failing sigs: ${recentFailSigs.length > 0 ? recentFailSigs.slice(-3).join(", ") : "none"}`,
],
}];
return findings;
}
async function checkErrorCorrections(_claims: Claim[]): Promise<Finding[]> {
const corrections = await tailJsonl<any>(join(KB_DIR, "error_corrections.jsonl"), TAIL_LINES);
if (corrections.length === 0) return [];
return [{
check: "kb_query",
severity: "info",
summary: `KB: ${corrections.length} error corrections on file (fail→succeed pairs)`,
evidence: [
corrections.length > 0
? `most recent: ${String(corrections[corrections.length - 1]?.sig_hash ?? "?").slice(0, 24)}`
: "none",
],
}];
}
async function checkBotCycles(): Promise<Finding[]> {
let entries: string[] = [];
try { entries = await readdir(BOT_CYCLES_DIR); }
catch { return []; }
const jsonFiles = entries.filter(e => e.endsWith(".json"));
if (jsonFiles.length === 0) return [];
// Sort by mtime desc, take most recent N
const withStat = await Promise.all(
jsonFiles.map(async name => {
try { return { name, mtime: (await stat(join(BOT_CYCLES_DIR, name))).mtimeMs }; }
catch { return { name, mtime: 0 }; }
}),
);
const recent = withStat.sort((a, b) => b.mtime - a.mtime).slice(0, MAX_BOT_CYCLE_FILES);
const outcomes: Record<string, number> = {};
for (const { name } of recent) {
try {
const r = JSON.parse(await readFile(join(BOT_CYCLES_DIR, name), "utf8"));
const o = String(r.outcome ?? "unknown");
outcomes[o] = (outcomes[o] ?? 0) + 1;
} catch { /* skip */ }
}
const summary = Object.entries(outcomes)
.sort((a, b) => b[1] - a[1])
.map(([k, v]) => `${k}=${v}`)
.join(", ");
const failCount = (outcomes["tests_failed"] ?? 0) + (outcomes["apply_failed"] ?? 0) + (outcomes["model_failed"] ?? 0);
return [{
check: "kb_query",
severity: failCount > recent.length / 2 ? "warn" : "info",
summary: `KB: bot recorded ${recent.length} recent cycles — ${summary || "no outcomes parsed"}`,
evidence: [
`dir: ${BOT_CYCLES_DIR}`,
`fail-class total: ${failCount} / ${recent.length}`,
],
}];
}
async function checkObserverStream(): Promise<Finding[]> {
const ops = await tailJsonl<any>(OBSERVER_OPS, TAIL_LINES);
if (ops.length === 0) return [];
const failures = ops.filter(o => o.ok === false).length;
return [{
check: "kb_query",
severity: "info",
summary: `KB: observer stream ${ops.length} recent ops, ${failures} failures`,
evidence: [
`source: ${OBSERVER_OPS}`,
`by source: ${observerBySource(ops)}`,
],
}];
}
function observerBySource(ops: any[]): string {
const c: Record<string, number> = {};
for (const o of ops) {
const s = String(o.source ?? "unknown");
c[s] = (c[s] ?? 0) + 1;
}
return Object.entries(c).sort((a, b) => b[1] - a[1]).map(([k, v]) => `${k}=${v}`).join(", ") || "empty";
}
// Audit-facts — reads data/_kb/audit_facts.jsonl (populated by every
// curated inference run via llm_team's extract pipeline). Each row
// has arrays: facts, entities, relationships. We explode entities and
// aggregate them across PRs using kb_index. An entity seen in 3+ PRs
// is a "core system entity" — we surface the top N as info context.
//
// Filters out short names (<3 chars, likely qwen2.5 truncation
// artifacts) and generic types ("string", "number") that would
// otherwise dominate the ranking.
const ENTITY_NAME_MIN_LEN = 3;
const GENERIC_ENTITY_NAMES = new Set([
"string", "number", "boolean", "any", "void", "unknown", "never",
"object", "array", "function", "const", "let", "var", "true", "false",
"null", "undefined", "promise", "map", "set", "record",
]);
async function checkAuditFacts(): Promise<Finding[]> {
// Read raw rows — each row has multiple entities, so we can't just
// use aggregate() directly (it's one-signature-per-row). Explode
// entities into (row, entity) pairs, then aggregate by entity name.
let raw: string;
try { raw = await (await import("node:fs/promises")).readFile(AUDIT_FACTS_JSONL, "utf8"); }
catch { return []; }
const lines = raw.split("\n").filter(l => l.length > 0);
if (lines.length === 0) return [];
interface EntityRow { entity_key: string; pr_number: number; type: string; name: string; description: string }
const entityRows: EntityRow[] = [];
for (const line of lines.slice(-TAIL_LINES * 2)) {
let row: any;
try { row = JSON.parse(line); } catch { continue; }
const prNum = Number(row?.pr_number);
if (!Number.isFinite(prNum)) continue;
for (const e of Array.isArray(row?.entities) ? row.entities : []) {
const name = String(e?.name ?? "").trim();
if (name.length < ENTITY_NAME_MIN_LEN) continue;
if (GENERIC_ENTITY_NAMES.has(name.toLowerCase())) continue;
entityRows.push({
entity_key: name.toLowerCase(),
pr_number: prNum,
type: String(e?.type ?? "?"),
name,
description: String(e?.description ?? "").slice(0, 160),
});
}
}
if (entityRows.length === 0) return [];
// Aggregate manually — one key per entity name, distinct_scopes by PR.
type Agg = { count: number; scopes: Set<number>; types: Set<string>; last_name: string; last_desc: string };
const byEntity = new Map<string, Agg>();
for (const r of entityRows) {
const a = byEntity.get(r.entity_key) ?? {
count: 0, scopes: new Set<number>(), types: new Set<string>(), last_name: "", last_desc: "",
};
a.count += 1;
a.scopes.add(r.pr_number);
a.types.add(r.type);
a.last_name = r.name;
a.last_desc = r.description;
byEntity.set(r.entity_key, a);
}
// Rank: require 2+ distinct PRs (same-PR entity-repeats don't count
// as "cross-cutting"). Take the top 5 to avoid flooding the verdict.
const ranked = Array.from(byEntity.entries())
.filter(([_, a]) => a.scopes.size >= 2)
.sort((a, b) => b[1].scopes.size - a[1].scopes.size || b[1].count - a[1].count)
.slice(0, 5);
if (ranked.length === 0) {
// Useful to know the KB is being populated — emit a single
// summary so operators see fact extraction is alive.
return [{
check: "kb_query",
severity: "info",
summary: `audit_facts KB has ${entityRows.length} entity-observations across ${new Set(entityRows.map(r => r.pr_number)).size} PRs (no cross-PR recurrences yet)`,
evidence: [`source: ${AUDIT_FACTS_JSONL}`],
}];
}
return ranked.map(([_, a]) => ({
check: "kb_query" as const,
severity: "info" as const,
summary: `core entity \`${a.last_name}\` recurs in ${a.scopes.size} PRs (types: ${Array.from(a.types).join(",")})`,
evidence: [
`count=${a.count} distinct_PRs=${a.scopes.size}`,
`description: ${a.last_desc.slice(0, 200)}`,
`PRs: ${Array.from(a.scopes).sort((x, y) => x - y).join(",")}`,
],
}));
}
// Audit-lessons — reads data/_kb/audit_lessons.jsonl (populated by
// every audit's appendAuditLessons). Uses the shared kb_index
// aggregator: groups by `signature`, distinct-scopes keyed by PR
// number, severity from ratingSeverity(agg) which applies the
// confidence × count rating (see kb_index.ts). This is the same
// aggregation any other KB reader uses — shared discipline, not
// per-check custom logic.
async function checkAuditLessons(): Promise<Finding[]> {
const bySig = await aggregate<any>(AUDIT_LESSONS_JSONL, {
keyFn: (r) => r?.signature,
scopeFn: (r) => (r?.pr_number !== undefined ? `pr-${r.pr_number}` : undefined),
checkFn: (r) => r?.check,
tailLimit: TAIL_LINES * 4,
});
if (bySig.size === 0) return [];
const findings: Finding[] = [];
for (const [sig, agg] of bySig) {
// Silent on first-ever occurrence — not yet signal.
if (agg.count < 2) continue;
const sev = ratingSeverity(agg);
findings.push({
check: "kb_query",
severity: sev,
summary: `recurring audit pattern (${agg.distinct_scopes} distinct PRs, ${agg.count} flaggings, conf=${agg.confidence.toFixed(2)}): ${agg.representative_summary.slice(0, 160)}`,
evidence: [
`signature=${sig}`,
`checks: ${agg.checks.join(",")}`,
`scopes: ${agg.scopes.slice(-6).join(",")}`,
formatAgg(agg),
],
});
}
return findings;
}
// Scrum-master reviews — the scrum pipeline writes one row per
// accepted per-file review. We match reviews whose `file` matches
// any path in the PR's diff, then surface the *preview* + which
// model the escalation ladder had to reach. If the scrum-master
// needed the 123B specialist or larger to resolve a file, that's
// a meaningful signal about the code's complexity — and it's
// surfaced to the PR without the auditor having to re-run the
// escalation ladder itself.
async function checkScrumReviews(prFiles: string[]): Promise<Finding[]> {
const rows = await tailJsonl<any>(SCRUM_REVIEWS_JSONL, TAIL_LINES);
if (rows.length === 0) return [];
// Match by exact file OR filename suffix — PR files arrive as
// `auditor/audit.ts`-style relative paths; scrum stores the same.
const norm = (p: string) => p.replace(/^\/+/, "").replace(/^home\/profit\/lakehouse\//, "");
const prSet = new Set(prFiles.map(norm));
// Keep only the most recent review per file (last-wins).
const latestByFile = new Map<string, any>();
for (const r of rows) {
const f = norm(String(r.file ?? ""));
if (!f) continue;
if (!prSet.has(f)) continue;
latestByFile.set(f, r);
}
if (latestByFile.size === 0) return [];
const findings: Finding[] = [];
for (const [file, r] of latestByFile) {
const model = String(r.accepted_model ?? "?");
const attempt = r.accepted_on_attempt ?? "?";
const treeSplit = !!r.tree_split_fired;
// Heuristic: if the scrum-master had to escalate past attempt 3,
// or had to tree-split, that's context the PR reviewer should see.
// Severity: info for low-escalation, warn if escalated far up
// the ladder (cloud specialist required).
const heavyEscalation = Number(attempt) >= 4;
const sev: "warn" | "info" = heavyEscalation ? "warn" : "info";
findings.push({
check: "kb_query",
severity: sev,
summary: `scrum-master review for \`${file}\` — accepted on attempt ${attempt} by \`${model}\`${treeSplit ? " (tree-split)" : ""}`,
evidence: [
`reviewed_at: ${r.reviewed_at ?? "?"}`,
`preview: ${String(r.suggestions_preview ?? "").slice(0, 300).replace(/\n/g, " ")}`,
],
});
}
return findings;
}